ESC & iPSC News Volume 16.33 | Aug 25 2021

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    2021-08-25 | ESC 16.33


    ESC & iPSC News by STEMCELL Technologies
    Vol. 16.33 – 25 August, 2021
    TOP STORY

    A DNA Repair Pathway Can Regulate Transcriptional Noise to Promote Cell Fate Transitions

    Researchers used screens to identify a compound, 5′-iodo-2′-deoxyuridine, that increased gene expression noise in mouse ESCs in culture without changing the overall rate of transcription of most genes.
    [Science]

    Abstract

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    PUBLICATIONSRanked by the impact factor of the journal

    Identification of Neural Oscillations and Epileptiform Changes in Human Brain Organoids

    Scientists demonstrated highly abnormal and epileptiform-like activity in organoids derived from iPSCs from individuals with Rett syndrome.
    [Nature Neuroscience]

    Abstract

    Spectroscopic Label-Free Microscopy of Changes in Live Cell Chromatin and Biochemical Composition in Transplantable Organoids

    Investigators developed an approach to form organoid from human iPSCs which, when combined with real-time label-free Raman spectroscopy of biochemical composition changes and confocal light scattering spectroscopic microscopy of chromatin transition, allowed for monitoring live differentiating organoids without the need to sacrifice a sample.
    [Science Advances]

    Full Article

    Human iPS-Derived Pre-Epicardial Cells Direct Cardiomyocyte Aggregation Expansion and Organization In Vitro

    Researchers showed that differentiating human iPSC-derived lateral plate mesoderm with BMP4, RA and VEGF could generate a premature form of epicardial cells expressing WT1, TBX18, SEMA3D, and SCX within seven days.
    [Nature Communications]

    Full Article

    Grafting of iPS Cell-Derived Tenocytes Promotes Motor Function Recovery after Achilles Tendon Rupture

    The authors demonstrated that iPSC-tenocyte grafting contributed to motor function recovery after Achilles tendon injury in rats via engraftment and paracrine effects.
    [Nature Communications]

    Full Article

    Chromatin lncRNA Platr10 Controls Stem Cell Pluripotency by Coordinating an Intrachromosomal Regulatory Network

    Scientists used a novel chromatin RNA in situ reverse transcription sequencing approach to profile long noncoding RNAs in the Oct4 promoter.
    [Genome Biology]

    Full Article

    Effective Control of Large Deletions after Double-Strand Breaks by Homology-Directed Repair and dsODN Insertion

    Investigators showed that large deletions were ubiquitous but were dependent on editing sites and cell types. Human primary T cells displayed more significant deletions than hematopoietic stem and progenitor cells, whereas they observed low levels in iPSCs.
    [Genome Biology]

    Full Article

    The Related Coactivator Complexes SAGA and ATAC Control Embryonic Stem Cell Self-Renewal through Acetyltransferase-Independent Mechanisms

    To determine whether SAGA and ATAC had redundant or specific functions, the authors compared the effects of histone acetyltransferase inactivation in each complex with that of inactivation of either SAGA or ATAC core subunits in mouse ESCs.
    [Cell Reports]

    Full ArticleGraphical Abstract

    CRISPR/Cas9 Correction of OPA1 c.1334G>A: p.R445H Restores Mitochondrial Homeostasis in Dominant Optic Atrophy Patient-Derived iPSCs

    Researchers demonstrated generation of patient-derived OPA1 c.1334G>A: p.R445H mutant iPSCs, followed by correction of OPA1 through CRISPR/Cas9 guided homology directed repair and evaluated the effect of OPA1 correction on mitochondrial homeostasis.
    [Molecular Therapy-Nucleic Acids]

    AbstractFull ArticleGraphical Abstract

    De Novo DNA Methyltransferases DNMT3A and DNMT3B Are Essential for XIST Silencing for Erosion of Dosage Compensation in Pluripotent Stem Cells

    Scientists reported that the de novo DNA methyltransferases DNMT3A/3B were necessary for XIST repression in female human PSCs. They found that the deletion of both genes, but not the individual genes, inhibited XIST silencing, maintained the heterochromatin mark of H3K27me3, and did not cause global overdosage in X-linked genes.
    [Stem Cell Reports]

    Full ArticleGraphical Abstract

    New hPSC SOX9 and INS Reporter Cell Lines Facilitate the Observation and Optimization of Differentiation into Insulin-Producing Cells

    For the purpose of easy monitoring of differentiation efficiencies into pancreatic progenitors and insulin-producing cells, investigators generated new reporter lines by knocking in a P2A-H-2Kk-F2A-GFP2 reporter gene into the SOX9-locus and a P2A-mCherry reporter gene into the INS-locus mediated by CRISPR/CAS9-technology.
    [Stem Cell Reviews and Reports]

    Full ArticleGraphical Abstract

    RNA Sequencing and Functional Studies of Patient-Derived Cells Reveal That Neurexin-1 and Regulators of This Pathway Are Associated with Poor Outcomes in Ewing Sarcoma

    Researchers isolated and characterized patient-derived ES primary cell cultures and daughter cancer stem-like cells to identify biomarkers of high-risk disease and candidate therapeutic targets for patients with Ewing sarcoma.
    [Cellular Oncology]

    Full Article

    Dynamic Landscape of Chromatin Accessibility and Transcriptomic Changes during Differentiation of Human Embryonic Stem Cells into Dopaminergic Neurons

    The authors demonstrated co-localization of CTCF with Polycomb-repressed chromatin marked by H3K27me3 in pluripotent cells, progressively decreasing in neural precursor cells and differentiated neurons.
    [Scientific Reports]

    Full Article


    Learn about immunological considerations for hPSC banking by watching Dr. David Turner's webinar from the Nature Research Round Table on hPSC Quality
    REVIEWS

    Human Embryonic Development: From Peri-Implantation to Gastrulation

    Scientists review the recent advances and possible future directions in the development of in vitro models to better understand human embryogenesis from peri-implantation to gastrulation.
    [Trends in Cell Biology]

    Full Article

    INDUSTRY AND POLICY NEWS

    UPMC-Pitt Researchers Receive Grant to Advance Liver Organoids

    Researchers from the University of Pittsburgh Liver Research Center, McGowan Institute for Regenerative Medicine, and Carnegie Mellon University’s Computational Biology Department have been awarded almost $1.5 million from the National Science Foundation to develop new approaches for producing liver organoids — tiny, lab-grown human organs that have potential for disease modeling, drug discovery, and transplantation.
    [University of Pittsburg]

    Press Release

    FEATURED EVENT

    6th World Congress of the Tissue Engineering and Regenerative Medicine International Society

    November 15 – 19, 2021
    Virtual

    > See All Events

    JOB OPPORTUNITIES

    Postdoctoral Research Fellow – Cardiac and Endothelial Cell Function

    Stanford University – La Jolla, California, United States

    Research Associate – Stem Cell Models

    Michigan State University – East Lansing, Michigan, United States

    Development Engineer – Cell Therapies and Regenerative Medicine

    Danaher – Toronto, Ontario, Canada

    Research Assistant – Pharmacology

    The Scripps Research Institute – La Jolla, California, United States

    Postdoctoral Associate – Neuroimmunology of Brain Repair

    MSH Medical School Hamburg – Hamburg, Germany

    > See All Jobs

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