ESC & iPSC News Volume 17.37 | Sep 28 2022

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    2022-09-28 | ESC 17.37


    ESC & iPSC News by STEMCELL Technologies
    Vol. 17.37 – 28 September, 2022
    TOP STORY

    Dominant Role of DNA Methylation over H3K9me3 for IAP Silencing in Endoderm

    Scientists showed that conditional knock-out of Setdb1 in mouse embryonic endoderm resulted in endogenous retrovirus de-repression in visceral endoderm descendants and did not occur in definitive endoderm.
    [Nature Communications]

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    Evolutionary Origin of Vertebrate OCT4/POU5 Functions in Supporting Pluripotency

    By coupling evolutionary sequence analysis with functional studies in mESCs, investigators found that the ability of POU5 proteins to support pluripotency originated in the gnathostome lineage, prior to the generation of two paralogues, Pou5f1 and Pou5f3 via gene duplication.
    [Nature Communications]

    Full Article

    PRC2-Indepdendent Actions of H3.3K27M in Embryonic Stem Cell Differentiation

    The authors studied the immediate, genome-wide consequences of the H3.3K27M mutation independent of Polycomb Repressor Complex 2 (PRC2) activity. They developed Doxycycline-inducible mouse ESCs carrying a single extra copy of WT-H3.3, H3.3K27M, and H3.3K27L all fused to HA.
    [Nucleic Acids Research]

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    LncRNA-Smad7 Mediates Cross-Talk between Nodal/TGF-β and BMP Signaling to Regulate Cell Fate Determination of Pluripotent and Multipotent Cells

    Scientists showed that the Nodal induced lncRNA-Smad7 regulated cell fate determination via repression of BMP signaling in mESCs.
    [Nucleic Acids Research]

    Full Article

    Induction of Functional Xeno-Free MSCs from Human iPSCs via a Neural Crest Cell Lineage

    The authors induced mesenchymal stem cells from hiPSCs via a neural crest cell lineage under xeno-free conditions and evaluated their in vivo functions.
    [NPJ Regenerative Medicine]

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    PIM3-AMPK-HDAC4/5 Axis Restricts MuERVL-Marked 2-Cell-Like State in Embryonic Stem Cells

    Downregulation, deletion, or inhibition of PIM3 activated MuERVL, 2-cell genes, and trophectodermal genes in ESCs. By screening PIM3-regulated pathways, scientists discovered AMPK as its key target.
    [Stem Cell Reports]

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    Hypoxia Induces an Early Primitive Streak Signature, Enhancing Spontaneous Elongation and Lineage Representation in Gastruloids

    The authors investigated the molecular effects of acute and prolonged hypoxia on embryonic and extra-ESCs as well as the functional impact on differentiation potential.
    [Development]

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    Customized Strategies for High-Yield Purification of Retinal Pigment Epithelial Cells Differentiated from Different Stem Cell Sources

    Researchers systematically compared five different retinal pigment epithelial purification methods, including manual, enzymatic, flow cytometry-based sorting or combinations thereof for parameters including cell throughput, yield, purity and functionality.
    [Scientific Reports]

    Full Article

    Passage Number Affects Differentiation of Sensory Neurons from Human Induced Pluripotent Stem Cells

    Scientists investigated the effect of passage number on iPSC differentiation to optimize the generation of sensory neurons (iPSC-dSNs). Three iPSC lines reprogrammed from the peripheral blood of three donors were differentiated into iPSC-dSNs at passage numbers within each of the following ranges: 5–10, 20–26, and 30–38.
    [Scientific Reports]

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    CTCF Acetylation at Lysine 20 Is Required for the Early Cardiac Mesoderm Differentiation of Embryonic Stem Cells

    Investigators showed that CCCTC-binding factor (CTCF) could be acetylated at lysine 20 (CTCF-K20) by CREB-binding protein (CBP) and deacetylated by histone deacetylase 6 (HDAC6). CTCF-K20 was required for the CTCF interaction with CBP.
    [Cell Regeneration]

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    STRAIGHT-IN Enables High-Throughput Targeting of Large DNA Payloads in Human Pluripotent Stem Cells

    The authors merged the strengths of different classes of site-specific recombinases and combined these with CRISPR-Cas9-mediated homologous recombination to develop a strategy for stringent site-specific replacement of genomic fragments at least 50 kb in size in hiPSCs.
    [Cell Reports Methods]

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    REVIEWS

    Modeling Urea Cycle Disorders Using iPSCs

    Investigators summarize the progress made thus far in generating 2D and 3D iPSCs models for urea cycle disorders (UCDs), the challenges encountered, and how iPSCs offer future avenues for innovation in developing the next-generation of therapies for UCDs.
    [NPJ Regenerative Medicine]

    Full Article

    Building In Vitro Models of the Brain To Understand the Role of APOE in Alzheimer’s Disease

    Scientists provide a brief background on Alzheimer’s disease (AD) in the context of APOE susceptibility and feature work employing hiPSC-derived brain cell and tissue models to interrogate the contribution of APOE in driving AD pathology.
    [Life Science Alliance]

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    INDUSTRY AND POLICY NEWS

    University of Manchester To Collaborate with IIT Kharagpur and Tata Research Centre To Contribute to Cancer Research

    The University of Manchester will collaborate with several Indian institutes, medical research centers and corporates to boost initiatives to find solutions to global problems. In Bengaluru, the delegation will visit the National Centre for Biological Sciences to build on links in areas such as stem cell research.
    [University of Manchester (Education Times)]

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    JOB OPPORTUNITIES

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    Yale University – New Haven, Connecticut, United States

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    InVitro Cell Research, LLC – Fort Lee, New Jersey, United States

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    Syracuse University – Syracuse, New York, United States

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    St. Jude Children’s Research Hospital – Memphis, Tennessee, United States

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