ESC & iPSC News Volume 17.46 | Nov 30 2022

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    2022-11-30 | ESC & iPSC 17.46


    ESC & iPSC News by STEMCELL Technologies
    Vol. 17.46 – 30 November, 2022
    TOP STORY

    Zygotic Genome Activation by the Totipotency Pioneer Factor Nr5a2

    Based on de novo motif searches, scientists identified the orphan nuclear receptor Nr5a2 as a key activator of major zygotic genome activation in mouse 2-cell embryos. Nr5a2 was required for progression beyond the 2-cell stage.
    [Science]

    Abstract
    He needed a better model system. So he invented a new organoid. Watch James Wells' webinar.
    PUBLICATIONSRanked by the impact factor of the journal

    TDP-43 Safeguards the Embryo Genome from L1 Retrotransposition

    Researchers showed that transactive response (TAR) DNA-binding protein 43 (TDP-43), mutations in which constitute a major risk factor for amyotrophic lateral sclerosis, inhibited long interspersed nuclear element-1 (L1) retrotransposition in mESCs and preimplantation embryos.
    [Science Advances]

    Full Article

    TERRA Regulates DNA G-Quadruplex Formation and ATRX Recruitment to Chromatin

    Investigators showed that telomeric-repeat containing RNA (TERRA) modulated ATRX occupancy on repetitive sequences and over genes, and maintained DNA G-quadruplex structures at TERRA target and non-target sites in mESC.
    [Nucleic Acids Research]

    Full Article

    Oct4:Sox2 Binding Is Essential for Establishing but Not Maintaining Active and Silent States of Dynamically Regulated Genes in Pluripotent Cells

    By quantitatively examining dynamic ranges of gene expression, the authors found that Oct4 and Sox2 enhancer binding was strongly enriched near genes subject to large dynamic ranges of expression among cell types, with binding sites near these genes usually within superenhancers.
    [Genes & Development]

    Abstract

    Modeling Sex Differences in Humans Using Isogenic Induced Pluripotent Stem Cells

    Researchers developed a cellular model to study sex differences in humans. Somatic cells from a mosaic Klinefelter syndrome patient were reprogrammed to generate isogenic iPSC lines with different sex chromosome complements: 47, XXY/46, XX/46, XY/45, and X0.
    [Stem Cell Reports]

    Full Article

    Naive Pluripotent and Trophoblastic Stem Cell Lines as a Model for Detecting Missing Proteins in the Context of the Chromosome-Centric Human Proteome Project

    Scientists analyzed naive pluripotent and trophoblastic stem cells and discovered 4 new missing proteins, thus contributing to the Chromosome-centric Human Proteome Project.
    [Journal of Proteome Research]

    Abstract

    Comparison of CRISPR-Cas9-Mediated Megabase-Scale Genome Deletion Methods in Mouse Embryonic Stem Cells

    The authors compared three methods to delete the 2.5-Mb Krüppel-associated box zinc finger protein gene cluster in mESCs using CRISPR-Cas9: (i) deletion by non-homologous end joining; (ii) homology-directed repair (HDR); (iii) HDR employing targeting vectors with a selectable marker and 1-kb homology arms.
    [DNA Research]

    Abstract

    Exposing Intracellular Molecular Changes during the Differentiation of Human-Induced Pluripotent Stem Cells into Erythropoietin-Producing Cells Using Raman Spectroscopy and Imaging

    Investigators explored intracellular molecular changes during the differentiation of hiPSCs into erythropoietin-producing cells using Raman spectroscopy and imaging.
    [Scientific Reports]

    Full Article

    Determining Epigenetic Memory in Kidney Proximal Tubule Cell Derived Induced Pluripotent Stem Cells Using a Quadruple Transgenic Reprogrammable Mouse

    Scientists reprogrammed proximal tubule cells and tail tip fibroblasts from a reprogrammable mouse to iPSCs and differentiated the iPSCs to renal progenitors to understand if epigenetic memory played a role in renal differentiation.
    [Scientific Reports]

    Full Article

    Differentiation of Enteric Neural Crest Cells Transplanted from SOX10-Venus Mouse Embryonic Stem Cells into the Gut of the Endothelin Receptor B Null Mouse Model

    Researchers established ESCs from Sox10-Venus+ mice. These cells were cultured for 2 days, then selected and co-cultured with either a dissociated control or Sox10-Venus–Ednrb KO mouse gut on embryonic day 13.5.
    [Pediatric Surgery International]

    Abstract
    Stay up-to-date with the latest stem cell research by listening to the Stem Cell Podcast!
    REVIEWS

    Current Progress in Understanding Schizophrenia Using Genomics and Pluripotent Stem Cells: A Meta-Analytical Overview

    The authors provide a simplistic overview of the current progress and advancements after synthesizing the enormous literature on schizophrenia (SCZ) genetics and SCZ iPSC-based models.
    [Schizophrenia Research]

    Full Article
    INDUSTRY AND POLICY NEWS

    UCI Opens Clinical Trial of Stem Cell-Derived Therapy for Muscle Atrophy

    UCI Health and UCI Alpha Clinic have launched the first and only US clinical trial to test the safety and tolerability of IMM01-STEM in patients with muscle atrophy related to knee osteoarthritis.
    [UCI Health]

    Press Release
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