Organoid News Volume 2.31 | Aug 19 2021

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    2021-08-19 | ON 2.31


    Organoid News by STEMCELL Technologies
    Vol. 2.31 – 19 August, 2021
    TOP STORY

    Molecular Phenotyping Reveals the Identity of Barrett’s Esophagus and Its Malignant Transition

    A combination of single-cell transcriptomic profiling, in silico lineage tracing from methylation, open chromatin and somatic mutation analyses, and functional studies in organoid models showed that Barrett’s esophagus originated from gastric cardia through c-MYC and HNF4A-driven transcriptional programs.
    [Science]

    AbstractPress Release

    Webinar: Advances in Human Brain Organoid Models
    PUBLICATIONSRanked by the impact factor of the journal

    Human Brain Organoids Assemble Functionally Integrated Bilateral Optic Vesicles

    Around day 30, brain organoids attempted to assemble optic vesicles, which developed progressively as visible structures within 60 days. These optic vesicle-containing brain organoids constituted a developing optic vesicle’s cellular components, including primitive corneal epithelial and lens-like cells, retinal pigment epithelia, retinal progenitor cells, axon-like projections, and electrically active neuronal networks.
    [Cell Stem Cell]

    Full ArticleGraphical Abstract

    Biliary Organoids Uncover Delayed Epithelial Development and Barrier Function in Biliary Atresia

    Scientists investigated the mechanisms linked to abnormal cholangiocyte development. They generated biliary organoids from liver biopsies of infants with biliary atresia and normal- and diseased-controls.
    [Hepatology]

    Abstract

    Live Cell Tagging Tracking and Isolation for Spatial Transcriptomics Using Photoactivatable Cell Dyes

    To examine cellular spatiotemporal activity, researchers developed eveloped Spatially PhotoActivatable Color Encoded Cell Address Tags to annotate, track, and isolate cells while preserving viability.
    [Nature Communications]

    Full Article

    Therapeutic Targeting of Endoplasmic Reticulum Stress in Acute Graft-versus-Host Disease

    Investigators showed that endoplasmic reticulum stress contributed to intestinal tissue injury during graft-versus-host disease and could be targeted pharmacologically.
    [Haematologica]

    Abstract

    3D In Vivo Magnetic Particle Imaging of Human Stem Cell-Derived Islet Organoid Transplantation Using a Machine Learning Algorithm

    Human PSCs-L1 were differentiated to islet organoids and labeled with superparamagnetic iron oxide nanoparticles. The phantoms comprising of different numbers of labeled islet organoids were imaged using an magnetic particle imaging system.
    [Nature Materials]

    Full Article

    LL-37 and HMGB1 Induce Alveolar Damage and Reduce Lung Tissue Regeneration via RAGE

    The effects of the receptor for advanced glycation end-products (RAGE) ligands LL-37 and HMGB1 were examined on airway inflammation and alveolar tissue damage in wild-type and RAGE deficient mice and on lung damage and repair responses using murine precision cut lung slices and organoids.
    [American Journal of Physiology-Lung Cellular and Molecular Physiology]

    Abstract

    Rapid Target Validation in a Cas9-Inducible hiPSC Derived Kidney Model

    The authors presented a methodology for direct differentiation of the CRISPR-targeted cell pools, using a doxycycline-inducible Cas9 expressing human iPSC line for high efficiency editing to eliminate the laborious clonal line generation steps.
    [Scientific Reports]

    Full Article

    Dorso-Ventral Heterogeneity in Tracheal Basal Stem Cells

    Large clones were found between cartilage and smooth muscle where subpopulation of dorsal basal cells (BCs) existed. 3D organoid culture of BCs demonstrated that dorsal BCs showed higher colony forming efficacy to ventral BCs.
    [Biology Open]

    Abstract

    Request your free copy of the 'Building Three-Dimensional Human Brain Organoids' Wallchart
    REVIEWS

    Next-Generation Cancer Organoids

    Investigators describe the current challenges and recent multidisciplinary advancements and opportunities for standardizing next-generation cancer organoid systems.
    [Nature Materials]

    Abstract

    The Age of Brain Organoids: Tailoring Cell Identity and Functionality for Normal Brain Development and Disease Modeling

    Because the functional activity of neural cells within brain organoids relies on cell repertoire and time in culture, scientists review data supporting the gradual formation of complex neural networks in light of cell maturity within brain organoids.
    [Frontiers in Neuroscience]

    Full Article
    INDUSTRY AND POLICY NEWS

    STEMCELL Technologies and Hubrecht Organoid Technology to Partner on Non-Oncology Organoid Drug Screening Services

    STEMCELL Technologies and Hubrecht Organoid Technology announced that they have signed an agreement for the use of tissue-derived organoids—including lung, intestinal, and liver organoids—for use in preclinical toxicology screening and non-cancer drug development services to be offered by the Contract Assay Services division of STEMCELL.
    [STEMCELL Technologies, Inc.]

    Press Release

    Vyant Bio and Cyclica Announce a Strategic Collaboration to Identify Compounds to Treat CDKL5 Deficiency Disorder

    Vyant Bio, Inc. and Cyclica, Inc. announced a non-exclusive strategic collaboration combining Vyant Bio’s patient-derived complex organoid biology alongside Cyclica’s proteome-wide, Artificial Intelligence enabled discovery platform to identify new treatments for CDKL5 Deficiency Disorder, a severe neurodevelopmental epilepsy disorder with no effective treatments or cure.
    [Vyant Bio, Inc.]

    Press Release
    FEATURED EVENT

    3D Cell Culture

    December 2, 2021
    Virtual

    > See All Events

    JOB OPPORTUNITIES

    Research Associate – Stem Cell Models

    Michigan State University – East Lansing, Michigan, United States

    Postdoctoral Fellow – Bioprinting for Pancreas Biofabrication

    University Medical Center Utrecht – Utrecht, Netherlands

    PhD Student – Stem Cell Biology in Intestinal Tumorigenesis

    Philipps University of Marburg – Marburg, Germany

    Research Technician – Pancreatic Organoids

    Cold Spring Harbor Laboratory – Long Island, New York, United States

    Postdoctoral Researcher – Neuroimmunology of Brain Repair

    MSH Medical School Hamburg – Hamburg, Germany

    > See All Jobs

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