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in silico

Integrated Whole Transcriptome and Small RNA Analysis Revealed Multiple Regulatory Networks in Colorectal Cancer

[Scientific Reports] Computational analysis using Ingenuity Pathway Analysis identified multiple activated signaling networks in colorectal cancer (CRC), including ERBB2, RABL6, FOXM1, and NFKB networks, while functional annotation highlighted activation of cell proliferation and migration as the hallmark of CRC.

miR-29a, b and c Regulate SLC5A8 Expression in Intestinal Epithelial Cells

[American Journal of Physiology-Gastrointestinal and Liver Physiology] Investigators demonstrated a novel finding in which miR-29a, b and c down-regulated SMCT-1 expression in colonic epithelial cells and may have partly explained the differential expression of these transporters along the length of the gastrointestinal tract.

ZFP36 Protects Lungs from Intestinal I/R-Induced Injury and Fibrosis through the CREBBP/p53/p21/Bax Pathway

[Cell Death & Disease] Researchers investigated the involvement of zinc finger protein 36 (ZFP36) and cAMP‐response element-binding protein binding protein (CREBBP) on ischemia–reperfusion (I/R)-induced lung injury in vivo and in vitro.

An Immunoinformatics Approach to Design a Multi-Epitope Vaccine against Mycobacterium tuberculosis Exploiting Secreted Exosome Proteins

[Scientific Reports] An in-silico approach has been adopted to construct a multi-epitope vaccine from selected immunogenic extracellular vesicle proteins to elicit a cellular as well as a humoral immune response.

Identification of Essential Genes for Escherichia coli Aryl Polyene Biosynthesis and Function in Biofilm Formation

[npj Biofilms and Microbiomes] Investigators highlighted key steps in the aryl polyene biosynthesis pathway that could be explored as potential drug targets for complementary strategies to reduce fitness and prevent biofilm formation of multi-drug resistant pathogens.

Imaging of Prostate Cancer: Optimizing Affinity to Prostate Specific Membrane Antigen by Spacer Modifications in a Tumor Spheroid Model

[Journal of Biomolecular Structure and Dynamics] Scientists investigated the impact of hydrophobic aromatic moieties in the peptide linker on prostate specific membrane antigen affinity and in vitro performance.

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